Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931295.1_cds_XP_016478127.1_69795
CDS Infomation

[gene=LOC107799520] [db_xref=GeneID:107799520] [protein=serine carboxypeptidase-like 45] [protein_id=XP_016478127.1] [location=join(10766..10994,11071..11175,11268..11363,11450..11542,11628..11713,11795..12085,12166..12305,12781..12873,13001..13118,13299..13538)] [gbkey=CDS]
Sequence

ATGGTTCCTTGGTTCTATGTCATCACTATCTTTTCTTCCTTCTTTTACTACAAATCAAGT
GCTGAGCTCATAACTTCTCTTCCTGGACAGCCTCCAAATATTTTCTTCAAACAATACTCT
GGTTATATTGTTACAAATTCTCAACATGGCAGAGCTCTATTTTATTACTTTGTCGAAGCA
GATTCAGAAAATGCAGCGTCACTTCCCCTTACTCTCTGGCTCAATGGAGGCCCTGGTTGT
TCATCTGTGGGTTTTGGTGCTTTTATGGAGCACGGTCCATTTCAGCCAGGGATTGATGGA
AACCTAATGAAAAACAAGTATTCCTGGAATTTGGTATCGAACATGTTATACGTGGAGTCC
CCGATTGGAGTAGGATTTTCATACTCAAATACAAGCTCAGACTACATCAATTGGGATGAT
ATGGCAACTGCTAAGGAGAATCTCCAATTCATCCTCAACTGGTTCAAGAAATTCCCCCAA
TATAGAAACTCGGATGTGTACTTAGCCGGGGAGAGTTATGCAGGTCACTATATACCACAG
CTGACAATATTGCTGCTTGATTACAACAGAAAGCCTAATGTTGAACCAATCAACCTTAAA
TCAATTGCACTGGGGAATCCACTGCTAGATCTTGAAATAAGCGTGAAGTCTGCTCAATAT
CTATGGTCACATGGTGCCATTTCTGATGAACTGCTTACTATGAAAAGAACAATCTGTAAC
GAAACGAGGTTCTTGCTGGAATCAATACATAATAATTTATCTAACGAGTGCAAGAAAGTT
TCGGAACTCACAGACGAGGAGATGGGAAGTGATATAGATATGGGCGATCTGCTCGCGCCA
ACATGTGTATCTTCTGGTACAGCAAAACAATTGGGAGCCCTTGCCACAATACATGGAAAA
TTTGTTAAGAAAGCTGTAGGAGAAGTTGCTGATCCATGCCTTACTGATAGGATAAATCTG
TACCTAAACAAGCCAGAAGTTCAAAAGGCACTACATGCCAACACCACTTACCTGCCATAT
GCCTGGGATTTTTGTTTGGGGAACCTTCACTATCGGAGAGAAGATTTAGCTGTAAACACT
ATACCTCTACTGTCAAATATTCTAAAAGAGAATATCCAAGTTCTACTTTTCAGTGGAGAT
CAAGATTCAAAAATCCCACTGACCCAAACTAGGAAAATTGCTAAGCTGCTTGCTCGAGAT
GTAAAGCTAGTTGCTTTAGACAAATATGGTTCTTGGTATGATGGTTTGCAGATTGGAGGG
TGGAGTCAGTCATTTGGAGGGCTAAGGGAAGGCAAAAACATTACATATTTAACATTTGCT
AGAGTTAGGGGTGCAGCTCATGAAGTCCCCTACACTTCTCCTTCACAAGCTCTTACACTT
TTTAGAGCATTTTTGAGAGGACATCCTCCACCACCAAGGAACAGCACCGCTCGAGCCCCT
ACAACAACAACAACCCAGTGGAATCTTACAAGTAGGGTCTGGGGAGGGTAG

Peptide Sequence

PEP ID

XP_016478127.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 45 [Nicotiana tabacum]
Sequence

MVPWFYVITIFSSFFYYKSSAELITSLPGQPPNIFFKQYSGYIVTNSQHGRALFYYFVEA
DSENAASLPLTLWLNGGPGCSSVGFGAFMEHGPFQPGIDGNLMKNKYSWNLVSNMLYVES
PIGVGFSYSNTSSDYINWDDMATAKENLQFILNWFKKFPQYRNSDVYLAGESYAGHYIPQ
LTILLLDYNRKPNVEPINLKSIALGNPLLDLEISVKSAQYLWSHGAISDELLTMKRTICN
ETRFLLESIHNNLSNECKKVSELTDEEMGSDIDMGDLLAPTCVSSGTAKQLGALATIHGK
FVKKAVGEVADPCLTDRINLYLNKPEVQKALHANTTYLPYAWDFCLGNLHYRREDLAVNT
IPLLSNILKENIQVLLFSGDQDSKIPLTQTRKIAKLLARDVKLVALDKYGSWYDGLQIGG
WSQSFGGLREGKNITYLTFARVRGAAHEVPYTSPSQALTLFRAFLRGHPPPPRNSTARAP
TTTTTQWNLTSRVWGG

Transcript Sequence

Gene sequence data has not been registered.